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susy derkins
Level 5: 1033 points
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Last Logged In: April 12th, 2014
BADGE: INTERREGNUM TEAM: Team Shplank TEAM: SCIENCE! TEAM: Run-of-the-mill taskers TEAM: MATHEMATICS TEAM: Lab Coats! TEAM: LØVE TEAM: Level Zerø TEAM: Casting Call TEAM: DIYvøters TEAM: Public Library Zero TEAM: INFØ TEAM: MXZero BART Psychogeographical Association Rank 1: Commuter Humanitarian Crisis Rank 1: Peacekeeper
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Irregular Animal Documentation by susy derkins

January 25th, 2008 11:11 PM / Location: 19.307396,-99.21049

INSTRUCTIONS: Document an animal you rarely see. Domesticated animals - whether friend, foe, or feral - don't count except in extraordinary circumstances. Beyond that, you're on your honour; in some areas, a squirrel might well be a rare sighting, just as in other areas it's quite common to see munk parakeets (i.e. the pet store kind) perched on telephone wires along Woodlawn Street...

Mood music. You might want to wait till after gorgeous John Butler finishes giving the introduction to the song and then start reading . Or, well, do as you please:
You need to a flashplayer enabled browser to view this YouTube video

Once upon a time, on a different Era, I documented the point of view of lab mice.
And while doing that task I got a genetically modified fluorescent mouse and took it home.
I decided that the rescue of the fluorescent mouse (it was a "waste" mouse, too expensive to feed if not included on an experiment) was perfectly within the spirit of Humanitarian Crisis (yeah, son, we had to join a group back then..), because, isn't a mouse genetically modified to be fluorescent a symbol of now being the best of times and the worst of times, that bittersweet "we can do anything: let´s do everything" feeling? (thanks, Hey Man Jackson).

So now, I had the opportunity to task by documenting this animal, which I believe qualifies as an animal that you rarely see. (Well, that you rarely see, because I see it every day, clean his cage, etc.)
But there is a problem: at plain sight, it looks exactly as a regular mouse.
So I can document it allright, say, running on his wheel, swimming, sleeping on my hoodie pocket, a day in the life of a very rare mouse, but is going to look exactly as a day in the life of any other mouse.
And since the instructions of the task state that "other than that you´re on your honour", I could very well be tasking on a technicality. Which would be completely wrong.

So I absolutely needed to document that my mouse glows in the dark when exposed to UV light.
But that turned out not to be easy.
First I tried shining the light of a Spy-Pen on it (failure!).
Later we took it to the school musical, that had black lights and all. Nothing.
Then I actually bought a black light bulb and installed it on a table lamp. Another failure.
Not enough UV light? Not the appropriate wavelenght?
Suspicion setting in. Did I really have a fluorescent mouse?
Maybe my friend at the animal facility had given me just any other mouse. Or someone there was a mice switcher. Or glow-in-the-dark-mice were just an urban legend. Aargh.

So, three days ago the mouse had to come with me on a field trip to the MIS, the molecular imaging system that we have at the lab, (that´s my Orwellian place of work, located within a dreaded corporate building).
The MIS is a cool piece of equipment generally used to produce the most boring images you can imagine: series of stripes at a various distances on a rectangle, but, yes, in super-high resolution.

I put the mouse inside the MIS, closed the door, turn on the transilluminator UV light, turn the image sensor to capture a dozen 1 sec exposure images every 5 seconds. Voilá!
Well, not really voilá, because the mouse didn´t sit still to get his picture taken.
Many frames of empty space.
Damn.
Is the mouse not fluorescing or is it mouse just hiding?
Tried again using the overhead white light. Just to see if he was there at all.
Time lapse capture: more empty pictures.
Hiding, then.
Phew.
Some of the pictures showed parts of the mouse happily walking around.
As you can see, it looks as a perfectly regular mouse.

epiwhite-circle_T3.jpg

epiwhite-circle_T1.jpg

Mmm. The critter needed to be restrained.

(I forgot to take pictures of this part with the actual fluorescent mouse, so I am using a dummy here, in case you´re wondering.)

I located a handy plastic bag holder, of the very expensive kind used in research labs as miniwaste baskets.

dummy-1.JPG

I put the mouse inside.

dummy-2.JPG

dummy-3.JPG


Then I put the plastic bag holder holding the mouse in place inside the MIS and closed the door.

MIS-1.JPG

MIS-2.JPG

This is how the time-lapse series looked:

You need to a flashplayer enabled browser to view this YouTube video


Yay! I do indeed have a glow-in-the dark mouse at home!

It glows. For real.

It glows. For real.

So, this is my dear GFP mouse, as seen from above while standing on a UV transilluminator.
All his live cells glow green under UV light, because they carry the green fluorescent protein from the sea pansy, Renilla reniformis, a soft coral.
Here you see that its skin glows green (well, you see it glow white because the CCD sensor of the MIS is monochromatic), and that the glow is more intense in the regions with no fur: feet, ears. Fur doesn´t glow because hair is made of dead cells. And newborn GF mice are all glowing green.

This last image is digitally modified for color. It shows how the mouse would look if the MIS had a RGB image sensor, instead of being just boringly monochromatic. Or how the mouse would have looked to people small enough to get themselves inside the MIS with it. Eerie green glow. Lighting up the plastic bag. Which you rarely see.

UV_T7-verde.jpg


- smaller

It glows. For real.

It glows. For real.











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10 comment(s)

John Butler is awesome!
posted by niallsb: Forevolution on January 26th, 2008 4:46 AM

The time lapse works really well with John Butler playing along.
Yay for strange glowing rodents!

(no subject)
posted by Jellybean of Thark on January 26th, 2008 8:54 AM


this is beautiful
your proof had a poetic
lilt felt good to read

(no subject)
posted by Frostbeard on January 26th, 2008 3:33 PM

GFP MOUSE! You and your fancy florescent proteins! It's no GFP bunny, but then what is?

(no subject)
posted by susy derkins on January 26th, 2008 8:24 PM

Yeah, I used to believe that the GFP bunny was real. Koreans have cats now.

I Know a Guy...
posted by Flitworth on January 27th, 2008 4:11 AM

My father knew a guy in graduate school (genetics/biochem) who was convinced that every living creature possessed some level of bioluminescence. The reason this was not confirmed, in his view, was simply a lack of study/sufficient dark. In an effort to prove his theory he created a sphere that was black and hollow on the inside that had a single pinhole in it. Essentially the man created the first poke-ball. His theory was that he could place a mouse inside then look through the peep hole and see the mouse's natural glow. I'm not sure what eventually happened with this but his initial testing failed because he did not account for the fact that the first thing a mouse does when placed in a poke-ball is jam its nose in the pinhole.

(no subject)
posted by susy derkins on January 27th, 2008 2:53 PM

Flitworth, that is the best bioluminescence story ever. As well as the best example for "Considerations in Experimental Design".
I can only add that if you´re ever about to eat pork and notice a strong red fluorescence in it, well, you might consider claim that you just remembered you´re a kosher-observing jewish, and decline. Neurocysticercosis is not pretty.
fluorescencecys39726.jpg

(no subject)
posted by Kariudo Chasseur on January 27th, 2008 3:21 PM

Vote for glowing meese!

(no subject)
posted by Betsy on March 26th, 2008 9:34 PM

I loved the suspense throughout the documentation--would the mouse glow, or not?

And was the bunny really a fake??!

(no subject)
posted by susy derkins on March 26th, 2008 10:23 PM

At least that´s how the story goes... It seems that rabbits are not as easy to manipulate: they weren´t cloned till 2003.
Glad that you liked it! :)

re:mood music
posted by MonkeyBoy Dan on July 19th, 2009 11:46 AM

Good grief! That Butler dude has Sabretooth claws!
schreiber-sabretooth01-762890.jpgwhy oh why cant I get my chops to grow so luxuriantly?